
The Visayas dive circuit: Moalboal, Bohol and Malapascua in one trip
How do you plan a Moalboal, Bohol and Malapascua trip in one go, and which order should you do it in?
Short answer
Do it as a one-way loop out of Cebu, in this order: Mactan airport to Moalboal, Moalboal to Bohol, Bohol to Malapascua, then Malapascua back to Cebu City for your flight home. The order is not a matter of taste. Every stop on this circuit is easy to reach except Malapascua, which is reached by an outrigger boat from New Maya port that stops running in the late afternoon, and that single cut-off is the only hard deadline on the whole trip. Running the loop this way puts the deadline on an internal leg you control, rather than on an inbound flight you do not. Budget around four days for the movement alone: the moves run roughly 3-3.5 hours, 6-7 hours, a full 9-11 hour travel day, and another 4-4.5 hours plus a boat.
Moalboal, Panglao and Malapascua are three of the best-known dive bases in the Philippines, and plenty of people want all three in one trip. Individually each is straightforward, and we have a page for every leg between them. Chained together they behave differently, because the legs interact: the day you leave one place decides whether you arrive at the next one at all.
This guide is about the chain rather than the legs. Which direction to run the loop and why, what each move actually costs you in hours, the one deadline that governs the entire schedule, how many days it genuinely takes, and which parts of it we arrange. Every figure here is the same one published on the individual route pages, and the ferry and outrigger fares stay where they belong: as the traveller’s own public tickets, not something we quote.
One cut-off governs the whole trip
There is a single constraint on this circuit and everything else bends around it. Malapascua has no bridge and no ferry terminal. You reach it on a public outrigger boat from New Maya port, at the far northern tip of Cebu, and those boats run through the day and stop in the late afternoon.
Nothing else on the loop works like that. The OceanJet fast ferries between Cebu City Pier 1 and Tagbilaran sail at roughly 30 to 45 minute intervals from early morning until the evening. The roads run at any hour. Moalboal does not need a boat at all, because the sardine run sits close enough to Panagsama Beach that you swim out to it from shore. So on three of the four moves a late start costs you comfort; on the leg into Malapascua a late start costs you the day, and leaves you looking for a room in Maya port with the island in sight.
Once you see that, the shape of a sensible itinerary follows: work backwards from the Maya boat on the day you travel to Malapascua, and never place that leg where you do not control the departure time.
Which direction to run the loop
The circuit works in either direction on a map, and only one of them is forgiving. The difference is where the Maya cut-off lands.
Run it Moalboal first and the hard leg, Bohol to Malapascua, falls in the middle of the trip. You start that day checking out of a Panglao hotel, which means you pick the Tagbilaran sailing yourself and can pick an early one. Run it in reverse and Malapascua becomes your first stop, so the boat cut-off has to be cleared on the day you land at Mactan, at the end of a drive north, on a schedule set by an airline rather than by you. One delayed inbound flight and the first night of the holiday is spent at the wrong end of Cebu.
The recommended direction has a second advantage at the other end. Finishing with Malapascua to Cebu City means the last move starts with a morning boat off the island and delivers you to a city hotel, which gives you a buffer night before an international flight instead of a dash to the terminal.
Leg 1, Mactan airport to Moalboal
About 100 km, roughly 3 to 3.5 hours by private car. The most forgiving arrival on the circuit: no boat, no cut-off, and a stop that still works if your flight lands late. This is why Moalboal earns the first slot.
Leg 2, Moalboal to Bohol (Tagbilaran)
About 90 km back up the west coast to Cebu City Pier 1, 2.5 to 3 hours by road, then the OceanJet fast ferry to Tagbilaran in about 2 hours. Allow 6 to 7 hours door to port with check-in. Sailings run to the evening, so a mid-morning departure is comfortable.
Leg 3, Bohol to Malapascua
The long one, and the only one with a deadline: ferry to Pier 1 (about 2 hours), road north to New Maya port (about 133 km, 4 to 4.5 hours), then the outrigger across (about 30 to 40 minutes). A full travel day, 9 to 11 hours door to door, and it needs an early-morning sailing out of Tagbilaran, not a mid-morning one.
Leg 4, Malapascua to Cebu City
The outrigger back to New Maya port, about 30 to 40 minutes, then roughly 133 km and 4 to 4.5 hours south by road. Boats off the island stop in the late afternoon too, so this is a morning departure and a full travel day rather than an afternoon errand.
How many days you actually need
Add the four moves up and they consume something close to four days on their own: half a day in, a travel day, a full travel day, and another full travel day out. That is before you have dived anything.
Then each stop has its own minimum. Malapascua is the strictest, because the thresher sharks at Monad Shoal are a pre-dawn, deep dive for certified divers, so you have to be on the island the night before and in the water before first light. One night is the bare minimum and it leaves no margin if the weather turns. Moalboal is the most relaxed, since the sardine run is a shore snorkel you can do on any morning you like. Panglao sits in between, with Alona, Balicasag and the Chocolate Hills countryside all wanting a day each.
In practice, ten days to a fortnight lets the circuit breathe. Under about a week, something has to give, and the honest advice is to drop a stop rather than compress the travel days, because the one thing you cannot compress is the leg into Malapascua.

Who handles which leg
This is a three-island trip, so it is worth being clear about what a quote from us does and does not cover, because the answer is different on each leg.
We arrange the Cebu-side road legs, which is the bulk of the moving: the airport run down to Moalboal, the drive back up to Pier 1, the Pier 1 pickup that meets your ferry and runs north to Maya, and the return south from Maya to your Cebu City hotel or the airport. On the Maya legs a driver meets the boat or the ferry with your name on a board, so there is no taxi to negotiate on the pavement with dive bags.
The Bohol-side transfers, from Tagbilaran port to Panglao, Alona or Anda and back, are arranged by our sibling site BookBohol.com. The ferry tickets and the Malapascua outrigger are fixed public fares you buy at the terminal or the beach, and we deliberately do not print their prices or timetables here, because those change and a stale number in a guide is worse than no number. Confirm the current sailing times close to your travel date.
If you ask for the whole circuit as one Multi-day quote, we price the Cebu-side legs together and time each one to the sailing you have chosen, so the handoffs line up instead of being four separate bookings that each assume the others went to plan.
A worked example, the way people actually book it
The chained version of this trip is not hypothetical; it is close to the most valuable enquiry shape we receive. A typical one runs like this, and it is a useful template because it respects every constraint above.
Arrive and settle at Moalboal
Land at Mactan and transfer straight down to Panagsama. Dive or snorkel the sardine run and the turtles, add a Pescador Island boat, and use Kawasan Falls an hour further south as a surface day if you need one.
Cross to Panglao
A mid-morning pickup, the drive to Pier 1 and an afternoon crossing to Tagbilaran. Alona Beach, Balicasag and the Chocolate Hills loop from there, with the Bohol-side transfers handled by BookBohol.
Move north to Malapascua
The one early start of the trip. An early Tagbilaran sailing, a driver waiting at Pier 1, the run north to Maya, and a daytime outrigger across. Arrive with the afternoon intact rather than racing the last boat.
Dive Monad Shoal, then head back
At least one pre-dawn thresher dive, then a morning boat off the island and the drive south to a Cebu City hotel. Fly home the following day with the travel day already behind you.

Variations that still work
The four-stop loop is the standard shape, but it is not the only one, and two variations come up often enough to be worth naming.
Skip Bohol, keep both Cebu dive sites
Moalboal straight to Malapascua is a single road move of about 210 km and 6 to 7 hours, so you can pair the sardine run with the thresher sharks without leaving Cebu at all. The same cut-off applies and it bites harder here, because the boat deadline sits at the end of a six-hour drive, so this one starts early.
Add Dumaguete instead of Malapascua
If you would rather not build a trip around a pre-dawn deep dive, the southern alternative swaps the northern tip for the Liloan to Sibulan crossing and the Apo Island side. It is a gentler circuit with a much shorter boat, and our sibling site negros.travel covers that half.
Run it as an open jaw
Nothing about the loop requires you to fly home from Mactan. If your onward flight leaves from Tagbilaran or Panglao, run the circuit Malapascua first and Bohol last instead, accepting the harder arrival in exchange for skipping the final drive south.
Frequently asked questions
What order should you visit Moalboal, Bohol and Malapascua in?
Moalboal first, then Bohol (Panglao), then Malapascua, then back to Cebu City. The reason is the outrigger boat to Malapascua, which stops running in the late afternoon. Running the loop this way means you approach that deadline on a day you start by checking out of a Panglao hotel, so you choose the sailing. Reverse the loop and you have to clear the same deadline on the day you fly in, on the airline’s schedule rather than your own.
How many days do you need for the Moalboal, Bohol and Malapascua circuit?
The four moves alone eat close to four days: about 3 to 3.5 hours in to Moalboal, 6 to 7 hours to Bohol, a full 9 to 11 hour day to Malapascua, and another full day back to Cebu City. Adding time to actually dive each site, ten days to a fortnight is comfortable. Under a week, drop a stop rather than compressing the travel days.
Is there a direct boat from Bohol to Malapascua?
No. There is no direct boat between them, and none between Moalboal and Bohol either. Every move on this circuit routes back through Cebu, either through Cebu City Pier 1 for the ferries or up the northern highway to New Maya port for the Malapascua outrigger. That is why the Bohol to Malapascua leg is a full travel day rather than a crossing.
What happens if you miss the last boat to Malapascua?
You do not get to the island that day. The outriggers from New Maya port stop in the late afternoon, and there is no bridge and no night service, so a late arrival at Maya means finding a room on the mainland at the end of a long travel day. This is the single reason the leg into Malapascua is planned backwards from the boat rather than forwards from your checkout.
Can one company arrange the whole circuit?
The Cebu-side road legs, yes, and that is most of the moving: the airport run to Moalboal, the drive to Pier 1, the Pier 1 pickup that meets your ferry and runs north to Maya, and the return south. The Bohol-side transfers are arranged by our sibling site BookBohol.com, and the ferry and outrigger tickets are fixed public fares you buy yourself. Ask for it as one Multi-day quote and we time each Cebu leg to the sailing you have picked.
Do you need to be a certified diver for this trip?
For Malapascua, effectively yes: the thresher sharks at Monad Shoal are a pre-dawn, deep dive for certified divers. Moalboal is the opposite, because the sardine run and the turtles sit close to shore off Panagsama Beach and you can snorkel out to them without a boat or a certification. Bohol offers both, so a mixed group can work if the non-divers are happy to sit out the one dawn dive.
Keep planning
- Mactan Airport to Moalboal transfer
- Moalboal to Bohol: road leg + ferry
- Bohol to Malapascua: the full travel day
- Malapascua back to Cebu City
- Moalboal to Malapascua direct
- Moalboal sardine run & turtles
- Malapascua thresher sharks
- Cebu to Bohol ferry: piers & crossing time
- The southern alternative: Cebu + Dumaguete